Entering Payroll Deductions - Canada
Q: How do I enter Canadian Payroll Deductions in Clarity Accounting?
Currently, our accounting software does not include Canadian Payroll Tables. However, we provide a cost effective solution for small businesses to keep track of payroll expenses and deductions by allowing you to add payroll deductions as expenses or adjustments. If you are new to running a small business, you will need to do some research on Canadian Payroll from the CRA website and how to electronically remit taxes to the CRA.
If you operate a business in the USA, please refer to our help file Entering Payroll Deductions - USA.
One great thing about the CRA is that they have a tool called the Payroll Deductions Online Calculator available for small business owners to get all the payroll deductions calculated online without having to do the work manually themselves. If you select the “Determine Gross Income” option and enter the gross salary of your employee in a given pay period (i.e. $1000 bi-weekly), then the payroll deductions online calculator generates a very nice printable table giving you a net pay amount with all the deductions included.
Instructions for Entering Canadian Payroll Deductions in Clarity Accounting
- Create payroll and expense accounts by going to the “Accounts” under the “Setup” section on your left navigation

- Scroll down to the liabilities section.

- Create your payroll deduction accounts by typing in the name and the description of the deduction. Also use select “Taxes and Remittances” as the type of Long term liability account you are creating.

- For Canadian payroll deductions, you will need to calculate and remit “federal tax deductions”, “provincial tax deductions”, “CPP deductions”, and “EI deductions”. There may be other applicable deductions you would like to track such as “requested additional tax deductions” or “other amounts deducted at source”. You may also use this section for to record other liabilities such as union dues and vacation pay. Please ensure you click the “Add Account” link to add each account.
- While still in the “Accounts” setup page, go under “Expenses” and add an Expense Account called “Employee Salaries”.

- To enter these payroll deductions, go to the “Expense” section and enter the relevant data.

- For the purpose of this help file, we would assume that Employee A has made $1000 (Gross Pay) in this pay period, please refer to the screen shot below:

Please enter deductions as a negative number (i.e. $-79.72) - Note, to get the Tax and Remittances Accounts to show up under the “Expense Account” drop down, you will have to scroll down to the bottom and click “Show All Accounts” or simply type the account name into the text box (we have a search function that will allow you to find the accounts quickly).

- After you click “Add” to add the payroll deduction expenses, you can click on “Edit” to view the summary of this transaction or click “Repeat” to repeat this transaction. The “Repeat” function is great because you can enter multiple payroll entries in a row by simply changing the employee’s name “Vendor” and the deductions amounts.

- You will be able to view deductions and pay history of your employees under the “Vendors” section.

- You can also view total payroll deductions in the Balance Sheet section.


- If you are an employer who is matching CPP contributions, you will have to create an expense account called “Matching CPP” and enter a separate expense transaction for your own records. This is independent of the payroll entries and you would remit this amount to the CRA.
If manually submitting payroll remittances is something you would like to do for your small business, you can easily keep track of all your remittances and expenses inside Clarity Accounting. You can try a 30 day free trial of Clarity Accounting with no obligations necessary to see how easy small business accounting can be. After all, Clarity Accounting is created by Canadians with all the sales taxes like GST, HST, PST, and QST functions included.

























